Department of Evolutionary Genetics: Publications
Peer-reviewed journal articles
Culina A, Adriaensen F, Bailey LD, Burgess MD, ... Visser ME (2020): Connecting the data landscape of long-term ecological studies: The SPI-Birds data hub. J ANIM ECOL. Epub ahead of print. doi:10.1111/1365-2656.13388
Fritze M, Puechmaille SJ, Costantini D, Fickel J, Voigt CC*, Czirják GÁ* (2021): Determinants of defence strategies of a hibernating European bat species towards the fungal pathogen Pseudogymnoascus destructans. DEV COMP IMMUNOL 119, 104017. Epub ahead of print. doi:10.1016/j.dci.2021.104017
Nguyen TV, Tilker A, Nguyen A, Hörig L, Axtner J, Schmidt A, Le M, Nguyen AHQ, Rawson BM, Wilting A, Fickel J (2021): Using terrestrial leeches to assess the genetic diversity of an elusive species: The Annamite striped rabbit Nesolagus timminsi. eDNA. Epub ahead of print. doi:10.1002/edn3.182
Shu L, Ludwig A, Peng Z (2021): Environmental DNA metabarcoding primers for freshwater fish detection and quantification: In silico and in tanks. ECOL EVOL. Epub ahead of print. doi:10.1002/ece3.7658
Westbury MV, Le Duc D, Duchêne DA, Krishnan A, Prost S, Rutschmann S, Grau JH, Dalen L, Weyrich A, Norén K, Werdelin L, Dalerum F, Schöneberg T, Hofreiter M (2021): Ecological specialisation and evolutionary reticulation in extant Hyaenidae. MOL BIOL EVOL msab055. Epub ahead of print. doi:10.1093/molbev/msab055
Publications highlighted in light blue have been generated in collaboration with other IZW departments (the authors' names are underlined).
Last updated on May 18th, 2021
Dayaram A, Seeber P, Courtiol A, Soilemetzidou S, Tsangaras K, Franz M, McEwen G, Azab W, Kaczensky P, Melzheimer J, East M, Ganbaatar O, Walzer C, Osterrieder N, Greenwood AD (2021): Seasonal host and ecological drivers may promote restricted water as a viral vector. SCI TOTAL ENVIRON 733, 145446. doi:10.1016/j.scitotenv.2021.145446
Kruszynski C, Bailey L, Courtiol A, Bach L, Bach P, Göttsche Ma, Göttsche Mi, Hill R, Lindecke O, Matthes H, Pommeranz H, Popa-Lisseanu AG, Seebens-Hoyer A, Tichomirowa M, Voigt CC (2021): Identifying migratory pathways of Nathusius’ pipistrelles (Pipstrellus nathusii) using stable hydrogen and strontium isotopes. RAPID COMMUN MASS SPECTROM 35, e9031. doi:10.1002/rcm.9031
Nguyen AT, Tilker A, Nguyen TV, Le M (2021): Camera-trap records of muntjac in the lowlands of Hue Saola Nature Reserve, central Vietnam. DEER SPECIALIST GROUP NEWSLETTER 32, 37–47.
Paijmans JLA, Barlow A, Becker MS, Cahill JA, Fickel J, Förster DWG, Gries K, Hartmann S, Havmøller RW, Henneberger K, Kern C, Kitchener AC, Lorenzen ED, Westbury MV, Mayer F, Obrien SJ, von Seth J, Sinding MHS, Spong G, Uphyrkina O, Wachter B, Dalén L, Bhak J, Manica A, Hofreiter M (2021): African and Asian leopards are highly differentiated at the genomic level. CURR BIOL 31, 1872-1882.e5. doi:10.1016/j.cub.2021.03.084
Premier J, Gahbauer M, Leibl F, Heurich M (2021): In-situ feeding as a new management tool to conserve orphaned Eurasian lynx (Lynx lynx). ECOL EVOL 11, 2963–2973. doi:10.1002/ece3.7261
Rhie A, McCarthy SA, Fedrigo O, Damas J, Formenti G, Koren S, Uliano-Silva M et al. (2021): Towards complete and error-free genome assemblies of all vertebrate species. NATURE 592, 737–746. doi:10.1038/s41586-021-03451-0
Schnitzler JG, Das K, Wohlsein P, Kuiken T, Ludwig A, Lieckfeldt D, Phan C, Phay S, Siebert U (2021): The Irrawaddy dolphin, Orcaella brevirostris from the Mekong river Cambodia: Preliminary health and toxicological investigations. AQUAT TOXICOL 234, 105812. doi:10.1016/j.aquatox.2021.105812
Sheraliev B, Rozimov A, Ludwig A, Peng Z (2021): Rediscovery of rare shovelnose sturgeons in the Amu Darya River, Uzbekistan. ORYX 55, 332. doi:10.1017/S0030605321000211
Tonnabel J, Klein EK, Ronce O, Oddou-Muratorio S, Rousset F, Olivieri I, Courtiol A*, Mignot A* (2021): Sex‐specific spatial variation in fitness in the highly dimorphic Leucadendron rubrum. MOL ECOL 30, 1721-1735. (* co-last) doi:10.1111/mec.15833
Totikov A, Tomarovsky A, Derezanin L, Dudchenko O, Lieberman-Aiden E, Koepfli K, Kliver S (2021): Chromosome-Level Genome Assemblies: Expanded Capabilities for Conservation Biology Research. Proceedings 76, 10. doi:10.3390/IECGE-07149
Vartak N, Guenther G, Joly F, Damle-Vartak A, Wibbelt G, Fickel J, Joers S, Begher-Tibbe B, Friebel A, Wansing K, Ghallab A, Rosselin M, Boissier N, Vignon-Clementel I, Hedberg C, Geisler F, Hofer H, Jansen P, Hoehme S, Drasdo D, Hengstler JG (2021): Intravital dynamic and correlative imaging reveals diffusion dominated canalicular and flow-augmented ductular bile flux. HEPATOLOGY 73, 1531-1550. doi:10.1002/hep.31422
Publications highlighted in light blue have been generated in collaboration with other IZW departments (the authors' names are underlined).
Last updated on May 18th, 2021
Arantes LS, Ferreira LCL, Driller M, Filho FPMR, Mazzoni CJ, Santos FR (2020): Genomic evidence of recent hybridization between sea turtles at Abrolhos Archipelago and its association to low reproductive output. SCI REP 10, 12847. doi:10.1038/s41598-020-69613-8
Arantes LS, Vargas SM, Santos FR (2020): Global phylogeography of the critically endangered hawksbill turtle (Eretmochelys imbricata). GENET MOL BIOL 43, e20190264. doi:10.1590/1678-4685-GMB-2019-0264
Arantes LS, Vilaça ST, Mazzoni CJ, Santos FR (2020): New genetic insights about hybridization and population structure of hawksbill and loggerhead turtles from Brazil. J HERED 111, 444–456. doi:10.1093/jhered/esaa024
Bailey LD, Kruuk LEB, Allen R, Clayton M, Stein J, Gardner JL (2020): Using different body size measures can lead to different conclusions about the effects of climate change. J BIOGEOGR 47, 1687–1697. doi: 10.1111/jbi.13850
Barnett R, Westbury MV, Sandoval-Velasco M, Vieira FG, Jeon S, Zazula G, Martin MD, Ho SYW, Mather N, Gopalakrishnan S, Ramos-Madrigal J, De Manuel M, Zepeda-Mendoza ML, Antunes A, Baez AC, De Cahsan B, Larson G, O’Brien SJ, Eizirik E, Johnson WE, Koepfli KP, Wilting A, Fickel J, Dalén L, Lorenzen ED, Marques-Bonet T, Hansen AJ, Zhang G, Bhak J, Yamaguchi N, Gilbert MTP (2020): Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, Homotherium latidens. CURR BIOL 30, 5018–5025. doi:10.1016/j.cub.2020.09.051
Barthel LMF, Wehner D, Schmidt A, Berger A, Hofer H, Fickel J (2020): Unexpected gene-flow in urban environments: The example of the European hedgehog. ANIMALS 10, 2315. doi:10.3390/ani10122315
Bohleber P, Casado M, Ashworth K, Baker CA, Belcher A, Caccavo JA, Jenkins HE, Satterthwaite E, Spolaor A, Winton VHL (2020): Successful practice in early career networks: insights from the polar sciences. ADV GEOSCI 53, 1–14. doi:10.5194/adgeo-53-1-2020
Brasier MJ, McCormack S, Bax N, Caccavo JA, Cavan E, Ericson JA, Figuerola B, Hancock A, Halfter S, Hellessey N, Höfer J, Puskic PS, de Oliveira CS, Subramaniam RC, Wallis J, Weldrick CK (2020): Overcoming the Obstacles Faced by Early Career Researchers in Marine Science: Lessons From the Marine Ecosystem Assessment for the Southern Ocean. FRONT MAR SCI 7, 692. doi:10.3389/fmars.2020.00692
Casado M, Gremion G, Rosenbaum P, Caccavo JA, Aho K, Champollion N, Connors SL, Dahood A, Fernandez A, Lizotte M, Mintenbeck K, Poloczanska E, Fugmann G (2020): The benefits to climate science of including early-career scientists as reviewers. GEOSCI COMM 3, 89–97. doi:10.5194/gc-3-89-2020
Derežanin L, Fickel J, Förster DW (2020): The complete mitochondrial genome of the meerkat (Suricata suricatta) and its phylogenetic relationship with other feliform species. MITOCHOND DNA Part B 5, 1100-1101. doi:10.1080/23802359.2020.1726221
Edelhoff H, Zachos FE, Fickel J, Epp CW, Balkenhol N (2020): Genetic analysis of red deer (Cervus elaphus) administrative management units in a human-dominated landscape. CONSERV GENET 21, 261-276. doi:10.1007/s10592-020-01248-8
Eder S, Bailey LD, Müller K (2020): Equilibration in freezing extender alters in vitro sperm-oviduct binding in the domestic cat (Felis catus). THERIOGENOLOGY 149, 79-87. doi:10.1016/j.theriogenology.2020.03.017
Glavaš OJ, Počanić P, Lovrić V, Derežanin L, Tadić Z, Lisičić D (2020): Morphological and ecological divergence in two populations of European glass lizard, Pseudopus apodus (Squamata: Anguidae). ZOOL RES 41, 172-181. doi:10.24272/j.issn.2095-8137.2020.025
Guerrero TP, Fickel J, Benhaiem S, Weyrich A (2020): Epigenomics and gene regulation in mammalian social systems. CURR ZOOL 66, 307–319. doi:10.1093/cz/zoaa005
Kravchenko K A, Vlaschenko A S, Lehnert L S, Courtiol A, Voigt C C (2020): Generational shift in the migratory common noctule bat: first-year males lead the way to hibernacula at higher latitudes. BIOL LETTERS 16, 20200351. doi:10.1098/rsbl.2020.0351
Kretzschmar P, Auld H, Boag P, Gansloßer U , Scott C, Van Coeverden de Groot JP, Courtiol A (2020): Mate choice, reproductive success and inbreeding in white rhinoceros: New insight for conservation management. EVOL APPL 13, 699-714. doi:10.1111/eva.12894
Kunde MN, Martins RF, Premier J, Fickel J, Förster DW (2020): Population and landscape genetic analysis of the Malayan sun bear Helarctos malayanus. CONSERV GENET 21, 123-135. doi:10.1007/s10592-019-01233-w
Li K*, Zhang S*, Song X*, Weyrich A*, Wang Y, Liu X, Wan N, Liu J, Lövy M, Cui H, Frenkel V, Titievsky A, Panov J, Brodsky L, Nevo E (2020): Genome evolution of blind subterranean mole rats: Adaptive peripatric versus sympatric speciation. PROC NATL ACAD SCI USA 117, 32499–32508. *shared first author. doi:10.1073/pnas.2018123117
Merling de Chapa M, Courtiol A, Engler M, Giese L, Rutz C, Lakermann M, Müskens G, van der Horst Y, Zollinger R, Wirth H, Kenntner N, Krüger O, Chakarov N, Müller A-K, Looft V, Grünkorn T, Hallau A, Altenkamp R, Krone O (2020): Phantom of the forest or successful citizen? Analysing how Northern Goshawks (Accipiter gentilis) cope with the urban environment. R SOC OPEN SCI 7, 201356. doi:10.1098/rsos.201356
Nguyen AT, Nguyen TV, Timmins R, McGowan P, Van Hoang T, Le MD (2020): Efficacy of camera traps in detecting primates in Hue Saola Nature Reserve. PRIMATES 61, 697–705. doi:10.1007/s10329-020-00823-4
Paijmans JLA, Barlow A, Henneberg K, Fickel J, Hofreiter M, Förster DW (2020): Ancestral mitogenome capture of the Southeast Asian banded linsang. PLOS ONE 15, e0234385. doi:10.1371/journal.pone.0234385
Premier J, Fickel J, Heurich M, Kramer Schadt S (2020): The boon and bane of boldness: movement syndrome as saviour and sink for population genetic diversity. MOV ECOL 8, 16. doi: 10.1186/s40462-0204-y
Reissmann M, Lutz W, Lieckfeldt D, Sandoval-Castellanos E, Ludwig A (2020): An agouti-signaling-protein mutation is strongly associated with melanism in European Roe Deer (Capreolus capreolus). GENES, 11, 647. doi:10.3390/genes11060647
Ripple WJ*, Wolf C*, Newsome TM, Phoebe B, Moomaw WR plus 11,258 scientist signatories from 153 countries. Signatories from the Leibniz-IZW: Benhaiem S, Calderon AP, Carrasco Valenzuela T, Courtiol A, Derežanin L, Gicquel M, Hofer H, Höner O, Jesus Fontes SA, Lorenz J, Louvrier J, Marggraf L, Mendes Veiga M, Portas R, Quetstroey M, Radchuk V, Roellig K, Wachter B, Zahmel J (2020): World Scientists’ Warning of a Climate Emergency. BIOSCI 70, 8-12. doi:10.1093/biosci/biz088
Shao F, Ludwig A, Mao Y, Liu N, Peng Z (2020): Chromosome-level genome assembly of the female western mosquitofish (Gambusia affinis). GIGASCIENCE 9, giaa092. doi:10.1093/gigascience/giaa092
Shu L, Ludwig A, Peng Z (2020): Standards for methods utilizing environmental DNA for detection of fish species. GENES 11, 296. doi:10.3390/genes11030296
Tikochinski Y, Carreras C, Tikochinski G, Vilaça ST (2020): Population-specific signatures of intra-individual mitochondrial DNA heteroplasmy and their potential evolutionary advantages. SCI REP 10, 211. doi:10.1038/s41598-019-56918-6
Tilker A, Abrams JF, Nguyen A, Hörig L, Axtner J, Louvrier J, Rawson BM, Nguyen HAQ, Guegan F, Nguyen TV, Le M, Sollmann R, Wilting A (2020): Identifying conservation priorities in a defaunated tropical biodiversity hotspot. DIVERS DISTRIB 26, 426–440. doi:10.1111/ddi.13029
Tilker A, Nguyen A, Abrams JF, Bhagwat T, Le M, Nguyen TV, Nguyen AT, Niedballa J, Sollmann R, Wilting A (2020): A little-known endemic caught in the South-east Asian extinction crisis: the Annamite striped rabbit Nesolagus timminsi. ORYX 54, 178-187. doi:10.1017/S0030605318000534
Wahedi A, Günther A, Weyrich A, Sonderheimer N (2020): The mitochondrial genome of Cavia aperea. MITOCHONDRIAL DNA B 5, 2147-2148. doi:10.1080/23802359.2020.1768918
Westbury MV, Hartmann S, Barlow A, Preick M, Ridush B, Nagel D, Rathgeber T, Ziegler R, Baryshnikov G, Sheng G, Ludwig A, Wiesel I, Dalen L, Bibi F, Werdelin L, Heller R, Hofreiter M (2020): Hyena palaeogenomes reveal a complex evolutionary history of cross-continental gene flow between spotted and cave hyena. SCI ADV 6, eaay0456. doi:10.1126/sciadv.aay0456
Weyrich A,Yasar S, Lenz D, Fickel J (2020): Tissue‑specific epigenetic inheritance after paternal heat exposure in male wild guinea pigs. MAMM GENOME 31, 157–169. doi:10.1007/s00335-020-09832-6
Publications highlighted in light blue have been generated in collaboration with other IZW departments (the authors' names are underlined).
Last updated on May 18th, 2021
Azevedo A, Bailey LD, Bandeira V, Dehnhard M, Fonseca C, de Sousa L, Jewgenow K (2019): Age, sex and storage time influence hair cortisol levels in a wild mammal population. PLOS ONE 14, e0221124. doi:10.1371/journal.pone.0221124.
Fages A, Hanghøj K, Khan N, Gaunitz C, Seguin-Orlando A, Leonardi M, McCrory Constantz C, Gamba C, Al-Rasheid KAS, Albizuri S, Alfarhan AH, Allentoft M, Alquraishi S, Anthony D, Baimukhanov N, Barrett JH, Bayarsaikhan J, Benecke N, Bernáldez-Sánchez E, Berrocal-Rangel L, Biglari F, Boessenkool S, Boldgiv B, Brem G, Brown D, Burger J, Crubézy E, Daugnora L, Davoudi H, de Barros Damgaard P, de Los Ángeles de Chorro Y de Villa-Ceballos M, Deschler-Erb S, Detry C, Dill N, do Mar Oom M, Dohr A, Ellingvåg S, Erdenebaatar D, Fathi H, Felkel S, Fernández-Rodríguez C, García-Viñas E, Germonpré M, Granado JD, Hallsson JH, Hemmer H, Hofreiter M, Kasparov A, Khasanov M, Khazaeli R, Kosintsev P, Kristiansen K, Kubatbek T, Kuderna L, Kuznetsov P, Laleh H, Leonard JA, Lhuillier J, Liesau von Lettow-Vorbeck C, Logvin A, Lõugas L, Ludwig A, Luis C, Arruda AM, Marques-Bonet T, Matoso Silva R, Merz V, Mijiddorj E, Miller BK, Mochlov O, Mohaseb FA, Morales A, Nieto-Espinet A, Nistelberger H, Onar V, Pálsdóttir AH, Pitulko V, Pitskhelauri K, Pruvost M, Rajic Sikanjic P, Rapan Papeša A, Roslyakova N, Sardari A, Sauer E, Schafberg R, Scheu A, Schibler J, Schlumbaum A, Serrand N, Serres-Armero A, Shapiro B, Sheikhi Seno S, Shevnina I, Shidrang S, Southon J, Star B, Sykes N, Taheri K, Taylor W, Teegen WR, Trbojević Vukičević T, Trixl S, Tumen D, Undrakhbold S, Usmanova E, Vahdati A, Valenzuela-Lamas S, Viegas C, Wallner B, Weinstock J, Zaibert V, Clavel B, Lepetz S, Mashkour M, Helgason A, Stefánsson K, Barrey E, Willerslev E, Outram AK, Librado P, Orlando L (2019): Tracking Five Millennia of Horse Management with Extensive Ancient Genome Time Series. CELL 177, 1419-1435.e31. doi:10.1016/j.cell.2019.03.049.
Fritze M, Costantini D, Fickel J, Wehner D, Czirják G*, Voigt C* (*These author contributed equally)(2019): Immune response of hibernating European bats to a fungal challenge. BIOL OPEN 8, bio046078. doi:10.1242/bio.046078
Heeger F, Wurzbacher C, Bourne EC, Mazzoni CJ*, Monaghan MT* (2019): Combining the 5.8S and ITS2 gene regions to improve classifications on fungi. METHODS ECOL EVOL 10, 1702-1711 (*These authors contributed equally). doi: 10.1111/2041-210x.13266
Hryciuk MM, Braun BC, Bailey LD, Jewgenow K (2019): Functional and morphological characterization of small and large steroidogenic luteal cells from domestic cats before and during culture. FRONT ENDOCRINOL 10, 724. doi:10.1016/j.ygcen.2019.113223
Krone O, Bailey LD, Jähnig S, Lauth T, Dehnhard M (2019): Monitoring corticoid metabolites in urine of white-tailed sea eagles: Negative effects of road proximity on breeding pairs. GEN COMP ENDOCRINOL 283, 113223. doi:10.1016/j.ygcen.2019.113223
Luo D, Li Y, Zhao Q, Zhao L, Ludwig A, Peng Z (2019): Highly Resolved Phylogenetic Relationships within Order Acipenseriformes According to Novel Nuclear Markers. GENES 10, 38. doi:10.3390/genes10010038
Magalhaes S, Courtiol A (2019): Tell me who you mate with, I’ll tell you what’s going on. PCI EVOL BIOL 100075. doi:10.24072/pci.evolbiol.100075
Mengüllüoğlu D, Ambarli H (2019): Assessing caracal-prey interactions by spatial and temporal analyses. EUR J WILDL RES 65, 54. doi:10.1007/s10344-019-1294-2
Mengüllüoğlu D, Fickel J, Hofer H, Förster DW (2019): Non-invasive faecal sampling reveals spatial organization and improves measures of genetic diversity for the conservation assessment of territorial species: Caucasian lynx as a case species. PLOS ONE 14, e0216549. doi: 10.1371/journal.pone.0216549
Mengüllüoğlu D, İlaslan E, Emir H, Berger A (2019): Diet and wild ungulate preferences of wolves in northwestern Anatolia during winter. PEERJ 7, e7446. doi:10.7717/peerj.7446
Niedballa J, Wilting A, Sollmann R, Hofer H, Courtiol A (2019): Assessing analytical methods for detecting spatiotemporal interactions between species from camera trapping data. REM SENS ECOL CONS 5, 272-285. doi: 10.1002/rse2.107
Numberger D, Dreier C, Vullioud C, Gabriel G, Greenwood AD, Grossart HP (2019): Recovery of influenza A viruses from lake water and sediments by experimental inoculation. PLOS ONE 14, e0216880. doi:10.1371/journal.pone.0218882
Radchuk V, Kramer-Schadt S, Fickel J, Wilting A (2019): Distribution of mammals in Southeast Asia: The role of the legacy of climate and species body mass. J BIOGEOGR 46, 2350-2362. doi:10.1111/jbi.13675
Radchuk V, Reed T, Teplitsky C, van de Pol M, Charmantier A, Hassall C, Adamík P, Adriaensen F, Ahola M, Arcese P, Miguel Avilés J, Balbontin J, Berg KS, Borras A, Burthe S, Clobert J, Dehnhard N, de Lope F, Dhondt AA, Dingemanse NJ, Eeva T, Fickel J, Filella I, Fossøy F, Goodenough AE, Hall SJG, Hansson B, Harris M, Hasselquist D, Hickler T, Joshi J, Kharouba H, Gabriel Martínez J, Mihoub J-B, Mills JA, Molina-Morales M, Moksnes A, Ozgul A, Parejo D, Pilard P, Poisbleau M, Rousset F, Rödel M-O, Scott D, Senar JC, Stefanescu C, Stokke BG, Tamotsu K, Tarka M, Tarwater C, Thonicke K, Thorley J, Wilting A, Tryjanowski P, Merilä J, Sheldon B, Møller AP, Matthysen E, Janzen F, Dobson S, Visser ME, Beissinger SR, Courtiol A*, Kramer-Schadt S*(2019): Adaptive responses of animals to climate change are most likely insufficient. NAT COMMUN 10, 3109. (*These authors contributed equally) doi:10.1038/s41467-019-10924-4
Seeber PA, McEwen GK, Löber U, Förster DW, East ML, Melzheimer J, Greenwood AD (2019): Terrestrial mammal surveillance using hybridization capture of environmental DNA from African waterholes. MOL ECOL RESOUR 19, 1486-1496. doi:10.1111/1755-0998.13069
Somerville V, Schwaiger M, Hirsch PE, Walser J-C, Bussmann K, Gebhardt I C, Weyrich A, Burkhardt-Holm P, Adrian-Kalchhauser I (2019): DNA methylation patterns in the round goby hypothalamus support an on-the-spot decision scenario for territorial behaviour. Special Issue on Epigenetics and Adaptation, GENES 10, 219. doi:10.3390/genes10030219
Stöck M, Fakharzadeh F, Kuhl H, Rozenblut-Kościsty B, Leinweber S, Patel R, Ebrahimi M, Voitel S, Schmidtler JF, Kami HG, Ogielska M, Förster DW (2019): Shedding Light on a Secretive Tertiary urodelean Relict: Hynobiid salamanders (Paradactylodon persicus sl) from Iran, Illuminated by Phylogeographic, Developmental and Transcriptomic Data. GENES 10, 306. doi:103390/genes10040306
Trinogga AL, Courtiol A, Krone O (2019): Fragmentation of lead-free and lead-based hunting rifle bullets under real life hunting conditions in Germany. AMBIO, 48, 1056-1064. doi:10.1007/s13280-019-01168-z
Vilaca ST, Lima CS, Mazzoni CJ, Santos FR, de Thoisy B (2019): Manatee genomics supports a special conservation area in the Guianas coastline under the influence of the Amazon River plume. ESTUAR COAST SHELF S 226, 106286. doi:10.1016/j.ecss.2019.106286
Vullioud C*, Davidian E*, Wachter B, Rousset F, Courtiol A*, Höner OP* (2019): Social support drives female dominance in the spotted hyaena. NAT ECOL EVOL 3, 71-76. (*These authors contributed equally). doi:10.1038/s41559-018-0718-9
Weyrich A, Lenz D, Fickel J (2019): Environmental change-dependent transgenerational epigenetic response. GENES 10, 4. doi:10.3390/genes10010004
Publications highlighted in light blue have been generated in collaboration with other IZW departments (the authors' names are underlined).
Last updated on May 18th, 2021
Ambarlı H, Mengüllüoğlu D, Fickel J, Förster DW (2018): Population genetics of the main population of brown bears in southwest Asia. PEERJ 6, e5660. doi:10.7717/peerj.5660
Bayerl H, Kraus RHS, Nowak C, Foerster DW, Fickel J, Kuehn R (2018): Fast and cost-effective single nucleotide polymorphism (SNP) detection in the absence of a reference genome using semideep next-generation Random Amplicon Sequencing (RAMseq). MOL ECOL RESOUR 18, 107-117. doi:10.1111/1755-0998.12717
Blankers T, Vilaça ST, Waurick I, Gray DA, Hennig RM, Mazzoni CJ, Mayerand F, Berdan EL (2018): Demography and selection shape transcriptomic divergence in field crickets. EVOLUTION 72, 553–567. doi:10.1111/evo.13435
Corbett S, Courtiol A, Lummaa V, Moorad J, Stearns S (2018): The transition to modernity and chronic disease: mismatch and natural selection. NAT REV GENET 19, 419-430 (all authors contributed equally). doi:10.1038/s41576-018-0012-3
Förster DW, Bull JK, Lenz D, Autenrieth M, Paijmans LAJ, Kraus RHS, Nowak C, Bayerl H, Kuehn R, Saveljev AP, Sindičić M, Hofreiter M, Schmidt K, Fickel J (2018): Targeted resequencing of coding DNA sequences for SNP discovery in nonmodel species. MOL ECOL RESOUR 18, 1356-1373. doi:10.1111/1755-0998.12924
Franz M, Kramer-Schadt S, Greenwood AD, Courtiol A (2018): Sickness-induced lethargy can increase host contact rates and pathogen spread in water-limited landscapes. FUNCT ECOL 32, 2194-2204. doi:10.1111/1365-2435.13149
Fuselli S, Baptista RP, Panziera A , Magi A, Guglielmi S, Tonin R, Benazzo A, Bauzer LG, Mazzoni CJ, Bertorelle G (2018): A new hybrid approach for MHC genotyping: high-throughput NGS and long read MinION nanopore sequencing, with application to the non-model vertebrate Alpine chamois (Rupicapra rupicapra). HEREDITY 121, 293–303. doi:10.1038/s41437-018-0070-5
Gaunitz C, Fages A, Hanghøj K, Albrechtsen A, Khan N, Schubert M, Seguin-Orlando A, Owens IJ, Felkel S, Bignon-Lau O, de Barros Damgaard P, Mittnik A, Mohaseb AF, Davoudi H, Alquraishi S, Alfarhan AH, Al-Rasheid KAS, Crubézy E, Benecke N, Olsen S, Brown D, Anthony D, Massy K, Pitulko V, Kasparov A, Brem G, Hofreiter M, Mukhtarova G, Baimukhanov N, Lõugas L, Onar V, Stockhammer PW, Krause J, Boldgiv B, Undrakhbold S, Erdenebaatar D, Lepetz S, Mashkour M, Ludwig A, Wallner B, Merz V, Merz I, Zaibert V, Willerslev E, Librado P, Outram AK, Orlando L (2018): Ancient genomes revisit the ancestry of domestic and Przewalski’s horses. SCIENCE 360, 111-114. doi:10.1126/science.aao3297
Heeger F, Bourne EC, Baschien C, Yurkov A, Bunk B, Spröer C, Overmann J, Mazzoni CJ, Monagham MT (2018): Long read DNA metabarcoding of ribosomal RNA in the analysis of fungi from aquatic environments. MOL ECOL RESOUR 18, 1500-1514. doi:10.1111/1755-0998.12937
Krützen M, Beasley I, Ackermann CY, Lieckfeldt D, Ludwig A, Ryan GE, Bejder L, Parra GJ, Wolfensberger R, Spencer PBS (2018): Demographic collapse and low genetic diversity of the Irrawaddy dolphin population inhabiting the Mekong River. PLOS ONE 13, e0189200. doi:10.1371/journal.pone.0189200
Lahdenperä M, U. Mar K, Courtiol A, Lummaa V (2018): Differences in age-specific mortality between wild-caught and captive-born Asian elephants. NAT COMMUN 9, 3023. doi:10.1038/s41467-018-05515-8
Lazarus D, Renaudie J, Lenz D, Diver P, Klump J (2018) Raritas and RaritasVox: Programs for counting high diversity categorical data with highly unequal abundances. PEERJ 6, e5453. doi:10.7717/peerj.5453
Long T, Leipe C, Jin G, Wagner M, Guo R, Schröder O, Tarasov PE (2018): The early history of wheat in China from 14C dating and Bayesian chronological modeling. NAT PLANTS 4, 272–279. doi:10.1038/s41477-018-0141-x
Martins RF, Schmidt A, Lenz D, Wilting A, Fickel (2018): Human-mediated introduction of introgressed deer across Wallace’s line: Historical biogeography of Rusa unicolor and R. timorensis. ECOL EVOL 8, 1465–1479. doi:10.1002/ece3.3754
Mengüllüoğlu D, Ambarlı H, Berger A, Hofer H (2018): Foraging ecology of Eurasian lynx populations in southwest Asia: Conservation implications for a diet-specialist. ECOL EVOL 8, 9451–9463. doi:10.1002/ece3.4439
Paijamans JLA, Barlow A, Förster DW, Henneberger K, Meyer M, Nickel B, Nagel D, Worsøe Havmøller R, Barysshnikov GF, Joger U, Rosendahl W, Hofreiter M (2018): Historical biogeography of the leopard (Panthera pardus) and its extinct Eurasian populations. BMC EVOL BIOL 18, 156. doi:10.1186/s12862-018-1268-0
Uliano da Silva M, Dondero F, Dan Otto T, Costa I, Costa Barroso Lima N, Alves Americo J, Mazzoni CJ, Prosdocimi F, de Freitas Rebelo M (2018): A hybrid-hierarchical genome assembly strategy to sequence the invasive golden mussel Limnoperna fortune. GIGASCIENCE 7, 1–10.doi:10.1093/gigascience/gix128
Weyrich A, Jeschek M, Schrapers KT, Lenz D, Chung H, Rübensam K, Yasar S, Schneemann M, Ortman S, Jewgenow K, Fickel J (2018): Diet changes alter paternally inherited epigenetic pattern in male Wild guinea pigs. ENVIRON EPIG 4, dvy011. doi:10.1093/eep/dvy011
Westbury MV, Hartmann S, Barlow A, Wiesel I, Leo V, Welch R, Parker DM, Sicks F, Ludwig A, Dalén L, Hofreiter M (2018): Extended and continuous decline in effective population size results in low genomic diversity in the world's rarest hyena species, the brown hyena. MOL BIOL EVOL 35, 1225-1237. doi:10.1093/molbev/msy037
Wutke S*, Sandoval-Castellanos E*, Benecke N, Döhle H-J, Friederich S, Gonzalez J, Hofreiter M, Lõugas L, Magnell O, Malaspinas A-S, Morales-Muñiz A, Orlando L, Reissmann M, Trinks A, Ludwig A (2018): Decline of genetic diversity in ancient domestic stallions in Europe. SCI ADV 4, eaap9691 (*contributed equally). doi:10.1126/sciadv.aap9691
Zhang C, Tong C, Ludwig A, Tang Y, Liu S, Zhang R, Feng C, Li G, Peng Z Zhao K (2018): Adaptive Evolution of the Eda Gene and Scales Loss in Schizothoracine Fishes in Response to Uplift of the Tibetan Plateau. INT J MOL SCI 19, 2953. doi:10.3390/ijms19102953
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